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Found 92 results for log2(Irr72h/Irr24h) between 0 and 1 and fdr <= 0.05. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC453_61283 Mlig002479.g3 8.05 Mlig002479.g3 {REF} {Length: 538} {MligTC453_61283} {TRANSSPLICED} {RNA1509_10341, RNA1509_11051, RNA1509_14185, RNA1509_14995, RNA1509_7451}
2. MligTC453_29251 Mlig026306.g3 7.88 Mlig026306.g3 {REF} {Length: 1986} {MligTC453_29251} {RNA1509_11780, RNA1509_18409}
3. MligTC453_34192 Mlig033649.g7 7.77 Mlig033649.g7 {REF} {Length: 1256} {MligTC453_34192} {RNA1509_3560, RNA1509_36840, RNA1509_4845, RNA1509_7701}
4. MligTC453_29253 Mlig014985.g1 7.62 Mlig014985.g1 {REF} {Length: 2999} {MligTC453_29253} {RNA1509_56361}
5. MligTC453_48499 Mlig032370.g1 7.56 Mlig032370.g1 {REF} {Length: 902} {MligTC453_48499} {RNA1509_21417, RNA1509_3881, RNA1509_41776, RNA1509_43586}
6. MligTC453_26157 Mlig112543.g1, Mlig012818.g5 6.62 Xins; Asexual_biased CA2

Mlig112543.g1 {REF} {Length: 2756} {MligTC453_26157} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.21, score=165.5]; Alpha-L-arabinofuranosidase B (ABFB) domain [PF05270.13, score=116.5]} {Human: ENSG00000104267, CA2, carbonic anhydrase 2, [Score=92.8, Expect=2e-20]; ENSG00000074410, CA12, carbonic anhydrase 12, [Score=91.3, Expect=2e-19]; ENSG00000168748, CA7, carbonic anhydrase 7, [Score=90.5, Expect=1e-19]; ENSG00000107159, CA9, carbonic anhydrase 9, [Score=88.6, Expect=5e-18]} {Mouse: ENSMUSG00000028463, Car9, carbonic anhydrase 9, [Score=91.3, Expect=4e-19]; ENSMUSG00000090236, Car15, carbonic anhydrase 15, [Score=90.9, Expect=2e-19]; ENSMUSG00000031883, Car7, carbonic anhydrase 7, [Score=88.2, Expect=6e-19]} {Dmel: FBgn0038956, CG5379, [Score=89.4, Expect=3e-19]} {Celegans: WBGene00000283, cah-5, Putative carbonic anhydrase 5, [Score=79.0, Expect=8e-16]} {Smed: dd_Smed_v6_5784_0_1, dd_Smed_v6_5784_0_1, [Score=90.1, Expect=6e-20]} {RNA1509_899} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.686198.0]}

Mlig012818.g5 {REF} {Length: 2756} {MligTC453_26157} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.21, score=165.6]; Alpha-L-arabinofuranosidase B (ABFB) domain [PF05270.13, score=116.5]} {Human: ENSG00000104267, CA2, carbonic anhydrase 2, [Score=92.8, Expect=2e-20]; ENSG00000074410, CA12, carbonic anhydrase 12, [Score=91.7, Expect=2e-19]; ENSG00000168748, CA7, carbonic anhydrase 7, [Score=90.5, Expect=1e-19]; ENSG00000107159, CA9, carbonic anhydrase 9, [Score=88.6, Expect=5e-18]} {Mouse: ENSMUSG00000028463, Car9, carbonic anhydrase 9, [Score=91.3, Expect=4e-19]; ENSMUSG00000090236, Car15, carbonic anhydrase 15, [Score=90.9, Expect=2e-19]; ENSMUSG00000031883, Car7, carbonic anhydrase 7, [Score=88.2, Expect=5e-19]} {Dmel: FBgn0038956, CG5379, [Score=89.4, Expect=3e-19]} {Celegans: WBGene00000283, cah-5, Putative carbonic anhydrase 5, [Score=79.0, Expect=8e-16]} {Smed: dd_Smed_v6_5784_0_1, dd_Smed_v6_5784_0_1, [Score=90.1, Expect=6e-20]} {RNA1509_899} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.686198.0]}
7. MligTC453_63876 Mlig055318.g15 6.59 Mlig055318.g15 {REF} {Length: 2374} {MligTC453_63876} {RNA1509_51886, RNA1509_59587}
8. MligTC453_61316 Mlig002859.g1 5.92 MEX3D Mlig002859.g1 {REF} {Length: 3006} {MligTC453_61316} {Pfam: KH domain [PF00013.29, score=73.6]; KH domain [PF07650.17, score=22.2]; NusA-like KH domain [PF13184.6, score=19.7]; KH domain [PF13083.6, score=19.6]} {Human: ENSG00000181588, MEX3D, mex-3 RNA binding family member D, [RH, Score=115, Expect=2e-26]; ENSG00000183496, MEX3B, mex-3 RNA binding family member B, [RH, Score=115, Expect=2e-26]} {Mouse: ENSMUSG00000048696, Mex3d, mex3 RNA binding family member D, [RH, Score=116, Expect=5e-27]; ENSMUSG00000057706, Mex3b, mex3 RNA binding family member B, [RH, Score=114, Expect=2e-26]} {Dmel: FBgn0039920, CG11360, [RH, Score=104, Expect=3e-23]} {Celegans: WBGene00003229, mex-3, Muscle EXcess, [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_1999_0_1, dd_Smed_v6_1999_0_1, [Score=65.5, Expect=4e-11]} {RNA1509_22712, RNA1509_23494, RNA1509_31603, RNA1509_3569, RNA1509_8776}
9. MligTC453_65038 Mlig063128.g5 5.91 Muscle; Xins; Sexual_biased TNNT2 Mlig063128.g5 {REF} {Length: 2055} {MligTC453_65038} {Pfam: Troponin [PF00992.20, score=42.1]} {Human: ENSG00000118194, TNNT2, troponin T2, cardiac type, [RH, Score=61.2, Expect=3e-10]; ENSG00000130595, TNNT3, troponin T3, fast skeletal type, [RH, Score=60.8, Expect=4e-10]} {Mouse: ENSMUSG00000061723, Tnnt3, troponin T3, skeletal, fast, [RH, Score=65.9, Expect=8e-12]; ENSMUSG00000026414, Tnnt2, troponin T2, cardiac, [RH, Score=63.5, Expect=8e-11]} {Dmel: FBgn0004169, up, upheld, [RH, Score=125, Expect=3e-32]} {Celegans: WBGene00006587, tnt-2, TropoNin T, [Score=98.2, Expect=2e-22]} {Smed: dd_Smed_v6_375_0_1, dd_Smed_v6_375_0_1, [Score=251, Expect=3e-81]} {RNA1509_33720, RNA1509_37233, RNA1509_801} {SMEDTYPE: Muscle [dd_Smed_v6_375_0_1, RAB28, member RAS oncogene family (RAB28)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.81690.0]}
10. MligTC453_63025 Mlig058113.g227 5.84

 Irradiation 

Mlig058113.g227 {REF} {Length: 3527} {MligTC453_63025} {Pfam: DDHD domain [PF02862.17, score=23.2]; Enhancer of polycomb-like [PF10513.9, score=22.1]} {RNA1509_1273}
11. MligTC453_51075 Mlig001134.g9, Mlig001134.g7 5.18 X2; Sexual_biased RHBDL2

Mlig001134.g9 {REF} {Length: 3289} {MligTC453_51075} {Pfam: Rhomboid family [PF01694.22, score=108.6]; Voltage gated chloride channel [PF00654.20, score=22.1]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [Score=160, Expect=8e-47]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=171, Expect=5e-51]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [Score=155, Expect=5e-44]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=160, Expect=2e-46]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [Score=265, Expect=1e-86]} {RNA1509_2577} {SMEDTYPE: X2 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.256538.0]}

Mlig001134.g7 {REF} {Length: 3148} {MligTC453_51075} {Pfam: Rhomboid family [PF01694.22, score=106.7]; EF-hand domain pair [PF13499.6, score=23.7]; Voltage gated chloride channel [PF00654.20, score=21.0]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [Score=161, Expect=1e-44]; ENSG00000141314, RHBDL3, rhomboid like 3, [Score=153, Expect=6e-41]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=172, Expect=6e-49]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [Score=165, Expect=2e-45]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=165, Expect=4e-46]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [Score=305, Expect=9e-99]} {RNA1509_2577, RNA1509_28194} {SMEDTYPE: X2 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.256538.0]}
12. MligTC453_63641 Mlig010261.g11, Mlig102843.g2, Mlig102843.g1 5.15 PKD2L1; PKD2

Mlig010261.g11 {REF} {Length: 3356} {MligTC453_63641} {Pfam: Polycystin cation channel [PF08016.12, score=493.4]; Ion transport protein [PF00520.31, score=89.5]; Ferredoxin I 4Fe-4S cluster domain [PF18109.1, score=29.8]; EF hand [PF00036.32, score=27.1]} {Human: ENSG00000118762, PKD2, polycystin 2, transient receptor potential cation channel, [Score=709, Expect=0.0]; ENSG00000107593, PKD2L1, polycystin 2 like 1, transient receptor potential cation channel, [Score=697, Expect=0.0]} {Mouse: ENSMUSG00000037578, Pkd2l1, polycystic kidney disease 2-like 1, [RH, Score=694, Expect=0.0]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=306, Expect=1e-90]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [RH, Score=391, Expect=1e-124]} {Smed: dd_Smed_v6_17348_0_3, dd_Smed_v6_17348_0_3, [RH, Score=742, Expect=0.0]} {RNA1509_31010, RNA1509_5592}

Mlig102843.g2 {REF} {Length: 3866} {MligTC453_63641} {Pfam: Ferredoxin I 4Fe-4S cluster domain [PF18109.1, score=31.7]; EF hand [PF00036.32, score=26.6]} {Human: ENSG00000118762, PKD2, polycystin 2, transient receptor potential cation channel, [Score=145, Expect=2e-40]} {Mouse: ENSMUSG00000034462, Pkd2, polycystic kidney disease 2, [Score=144, Expect=3e-38]} {Smed: dd_Smed_v6_17348_0_4, dd_Smed_v6_17348_0_4, [Score=178, Expect=7e-54]} {RNA1509_5592}

Mlig102843.g1 {REF} {Length: 4339} {MligTC453_63641} {Pfam: Polycystin cation channel [PF08016.12, score=385.1]; Ion transport protein [PF00520.31, score=61.5]; EF hand [PF00036.32, score=23.2]} {Human: ENSG00000107593, PKD2L1, polycystin 2 like 1, transient receptor potential cation channel, [Score=538, Expect=0.0]; ENSG00000118762, PKD2, polycystin 2, transient receptor potential cation channel, [Score=524, Expect=2e-174]} {Mouse: ENSMUSG00000037578, Pkd2l1, polycystic kidney disease 2-like 1, [Score=546, Expect=0.0]; ENSMUSG00000034462, Pkd2, polycystic kidney disease 2, [Score=523, Expect=3e-174]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=242, Expect=9e-69]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=324, Expect=7e-101]} {Smed: dd_Smed_v6_17348_0_3, dd_Smed_v6_17348_0_3, [Score=602, Expect=0.0]} {RNA1509_31010}
13. MligTC453_32827 Mlig033713.g18 5.05 Neural (non-ciliated); Xins NLGN3 Mlig033713.g18 {REF} {Length: 3142} {MligTC453_32827} {Pfam: Carboxylesterase family [PF00135.28, score=295.4]} {Human: ENSG00000196338, NLGN3, neuroligin 3, [Score=166, Expect=3e-43]; ENSG00000165246, NLGN4Y, neuroligin 4 Y-linked, [Score=166, Expect=2e-43]; ENSG00000170835, CEL, carboxyl ester lipase, [Score=165, Expect=4e-43]; ENSG00000146938, NLGN4X, neuroligin 4 X-linked, [Score=164, Expect=1e-42]; ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=163, Expect=5e-44]; ENSG00000114200, BCHE, butyrylcholinesterase, [Score=162, Expect=7e-43]; ENSG00000169760, NLGN1, neuroligin 1, [Score=161, Expect=1e-41]} {Mouse: ENSMUSG00000031302, Nlgn3, neuroligin 3, [Score=165, Expect=2e-44]; ENSMUSG00000063887, Nlgn1, neuroligin 1, [Score=164, Expect=7e-43]} {Dmel: FBgn0051146, Nlg1, Neuroligin 1, [Score=160, Expect=2e-41]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=154, Expect=3e-40]} {Smed: dd_Smed_v6_10334_0_1, dd_Smed_v6_10334_0_1, [Score=175, Expect=2e-47]} {RNA1509_1585} {SMEDTYPE: Neural (non-ciliated) [dd_Smed_v6_10334_0_1, butyrylcholinesterase (BCHE)]} {SMEDTYPE: Xins [raj_facs_types]}
14. MligTC453_65711 Mlig052096.g33 5 X1 TAF10 Mlig052096.g33 {REF} {Length: 1733} {MligTC453_65711} {TRANSSPLICED} {Pfam: Transcription initiation factor TFIID 23-30kDa subunit [PF03540.13, score=85.0]} {Human: ENSG00000166337, TAF10, TATA-box binding protein associated factor 10, [RH, Score=120, Expect=4e-34]} {Mouse: ENSMUSG00000043866, Taf10, TATA-box binding protein associated factor 10, [RH, Score=120, Expect=2e-34]} {Dmel: FBgn0026324, Taf10b, TBP-associated factor 10b, [RH, Score=96.7, Expect=6e-26]} {Celegans: WBGene00006392, taf-10, Transcription initiation factor TFIID subunit 10, [RH, Score=67.0, Expect=2e-14]} {Smed: dd_Smed_v6_7424_0_1, dd_Smed_v6_7424_0_1, [RH, Score=84.0, Expect=2e-21]} {RNA1509_11017} {SMEDTYPE: X1 [raj_facs_types]}
15. MligTC453_41199 Mlig005449.g6 4.96 Xins; Asexual_biased ANK1 Mlig005449.g6 {REF} {Length: 6174} {MligTC453_41199} {Pfam: Ankyrin repeats (3 copies) [PF12796.7, score=165.5]; Ankyrin repeats (many copies) [PF13637.6, score=147.3]; Ankyrin repeat [PF00023.30, score=129.2]; Ankyrin repeats (many copies) [PF13857.6, score=124.7]; Ankyrin repeat [PF13606.6, score=108.9]; Mab-21 protein [PF03281.14, score=31.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=169, Expect=3e-42]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=166, Expect=1e-41]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=160, Expect=2e-39]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=160, Expect=7e-40]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=142, Expect=2e-34]} {RNA1509_161} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.11579.1]}
16. MligTC453_16254 Mlig033966.g1 4.91 Mlig033966.g1 {REF} {Length: 1786} {MligTC453_16254} {Pfam: Fibronectin type II domain [PF00040.19, score=55.8]} {RNA1509_20795, RNA1509_22407, RNA1509_26948, RNA1509_26955, RNA1509_54169, RNA1509_58952}
17. MligTC453_32823 Mlig028046.g1 4.7 Neural (non-ciliated); Xins ACHE Mlig028046.g1 {REF} {Length: 3203} {MligTC453_32823} {Pfam: Carboxylesterase family [PF00135.28, score=364.8]} {Human: ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=216, Expect=4e-60]; ENSG00000196338, NLGN3, neuroligin 3, [Score=208, Expect=7e-56]; ENSG00000114200, BCHE, butyrylcholinesterase, [Score=206, Expect=5e-57]} {Mouse: ENSMUSG00000027792, Bche, butyrylcholinesterase, [Score=204, Expect=3e-56]; ENSMUSG00000023328, Ache, acetylcholinesterase, [Score=203, Expect=1e-55]; ENSMUSG00000031302, Nlgn3, neuroligin 3, [Score=199, Expect=4e-53]} {Dmel: FBgn0001987, Gli, Gliotactin, [Score=193, Expect=9e-51]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=204, Expect=3e-56]} {Smed: dd_Smed_v6_10334_0_1, dd_Smed_v6_10334_0_1, [Score=194, Expect=1e-52]} {RNA1509_10255} {SMEDTYPE: Neural (non-ciliated) [dd_Smed_v6_10334_0_1, butyrylcholinesterase (BCHE)]} {SMEDTYPE: Xins [raj_facs_types]}
18. MligTC453_36922 Mlig018004.g3, Mlig023066.g16 4.65 maintenance ABCA1

Mlig018004.g3 {REF} {Length: 7827} {MligTC453_36922} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [Score=94.4, Expect=5e-22]; ENSG00000107331, ABCA2, ATP binding cassette subfamily A member 2, [Score=91.3, Expect=6e-21]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [Score=95.5, Expect=2e-22]; ENSMUSG00000026944, Abca2, ATP-binding cassette, sub-family A (ABC1), member 2, [Score=92.0, Expect=2e-21]} {Dmel: FBgn0031170, CG1718, [Score=91.7, Expect=2e-21]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=67.4, Expect=3e-13]} {Smed: dd_Smed_v6_21124_0_1, dd_Smed_v6_21124_0_1, [Score=80.5, Expect=1e-19]} {RNA1509_2597} {SMEDTYPE: maintenance [8]}

Mlig023066.g16 {REF} {Length: 6446} {MligTC453_36922} {Pfam: ABC transporter [PF00005.27, score=177.3]; ABC-2 family transporter protein [PF12698.7, score=155.4]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.6, score=73.2]; Domain of unknown function (DUF4162) [PF13732.6, score=28.6]} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [Score=1090, Expect=0.0]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [Score=1088, Expect=0.0]} {Dmel: FBgn0031170, CG1718, [Score=443, Expect=7e-129]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=356, Expect=6e-100]} {Smed: dd_Smed_v6_2300_0_7, dd_Smed_v6_2300_0_7, [RH, Score=1005, Expect=0.0]} {RNA1509_2597} {SMEDTYPE: maintenance [8]}
19. MligTC453_57999 Mlig108053.g1 4.52 Mlig108053.g1 {REF} {Length: 701} {MligTC453_57999} {RNA1509_17403}
20. MligTC453_44365 Mlig038077.g48, Mlig038077.g19 4.5

Mlig038077.g48 {REF} {Length: 671} {MligTC453_44365} {NoTransDecoderORF} {RNA1509_20243}

Mlig038077.g19 {REF} {Length: 3911} {MligTC453_44365} {RNA1509_17696}
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