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Found 2798 results for class "Germline". Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC453_33565 Mlig023254.g1 10.41

 Int S/G2/M 

 Germline 

 S/G2/M, no gonads 

X1 HSP90AA1 Mlig023254.g1 {REF} {Length: 3175} {MligTC453_33565} {Pfam: Hsp90 protein [PF00183.18, score=778.2]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.26, score=56.1]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.6, score=40.4]} {Human: ENSG00000080824, HSP90AA1, heat shock protein 90 alpha family class A member 1, [RH, Score=1074, Expect=0.0]; ENSG00000096384, HSP90AB1, heat shock protein 90 alpha family class B member 1, [RH, Score=1058, Expect=0.0]} {Mouse: ENSMUSG00000021270, Hsp90aa1, heat shock protein 90, alpha (cytosolic), class A member 1, [RH, Score=1088, Expect=0.0]; ENSMUSG00000023944, Hsp90ab1, heat shock protein 90 alpha (cytosolic), class B member 1, [RH, Score=1064, Expect=0.0]} {Dmel: FBgn0001233, Hsp83, Heat shock protein 83, [RH, Score=1101, Expect=0.0]} {Celegans: WBGene00000915, daf-21, Heat shock protein 90, [RH, Score=1035, Expect=0.0]} {Smed: dd_Smed_v6_56_0_2, dd_Smed_v6_56_0_2, [RH, Score=1131, Expect=0.0]} {RNA1509_125, RNA1509_806, RNA1509_874} {SMEDTYPE: X1 [raj_facs_types]}
2. MligTC453_33566 Mlig033688.g134 10.17

 Int S/G2/M 

 Germline 

 S/G2/M, no gonads 

X1 HSP90AA1 Mlig033688.g134 {REF} {Length: 3179} {MligTC453_33566} {Pfam: Hsp90 protein [PF00183.18, score=778.2]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.26, score=56.1]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.6, score=40.4]} {Human: ENSG00000080824, HSP90AA1, heat shock protein 90 alpha family class A member 1, [RH, Score=1074, Expect=0.0]; ENSG00000096384, HSP90AB1, heat shock protein 90 alpha family class B member 1, [RH, Score=1058, Expect=0.0]} {Mouse: ENSMUSG00000021270, Hsp90aa1, heat shock protein 90, alpha (cytosolic), class A member 1, [RH, Score=1088, Expect=0.0]; ENSMUSG00000023944, Hsp90ab1, heat shock protein 90 alpha (cytosolic), class B member 1, [RH, Score=1064, Expect=0.0]} {Dmel: FBgn0001233, Hsp83, Heat shock protein 83, [RH, Score=1101, Expect=0.0]} {Celegans: WBGene00000915, daf-21, Heat shock protein 90, [RH, Score=1035, Expect=0.0]} {Smed: dd_Smed_v6_56_0_2, dd_Smed_v6_56_0_2, [RH, Score=1131, Expect=0.0]} {RNA1509_125, RNA1509_12816, RNA1509_2660, RNA1509_32, RNA1509_7931, RNA1509_9405} {SMEDTYPE: X1 [raj_facs_types]}
3. MligTC453_34080 Mlig010745.g4 9.86

 Int S/G2/M 

 Germline 

Asexual_biased HSPA8 Mlig010745.g4 {REF} {Length: 2560} {MligTC453_34080} {Pfam: Hsp70 protein [PF00012.20, score=871.1]; MreB/Mbl protein [PF06723.13, score=63.2]; Cell division protein FtsA [PF14450.6, score=23.2]} {Human: ENSG00000109971, HSPA8, heat shock protein family A (Hsp70) member 8, [RH, Score=1141, Expect=0.0]} {Mouse: ENSMUSG00000015656, Hspa8, heat shock protein 8, [RH, Score=1141, Expect=0.0]; ENSMUSG00000007033, Hspa1l, heat shock protein 1-like, [RH, Score=1085, Expect=0.0]} {Dmel: FBgn0266599, Hsc70-4, Heat shock protein cognate 4, [RH, Score=1093, Expect=0.0]} {Celegans: WBGene00002005, hsp-1, Heat shock 70 kDa protein A, [RH, Score=1079, Expect=0.0]} {Smed: dd_Smed_v6_15_0_1, dd_Smed_v6_15_0_1, [RH, Score=1160, Expect=0.0]} {RNA1509_10685, RNA1509_172, RNA1509_29431, RNA1509_3974} {SMEDTYPE: Asexual_biased [CUFF.501819.0]}
4. MligTC453_26278 Mlig067234.g2 9.31

 Irradiation 

 Int S/G2/M 

 Germline 

WBP2NL Mlig067234.g2 {REF} {Length: 1466} {MligTC453_26278} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [RH, Score=54.7, Expect=3e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=59.3, Expect=1e-09]} {RNA1509_47}
5. MligTC453_34928 Mlig030334.g9 9.26

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig030334.g9 {REF} {Length: 1353} {MligTC453_34928} {RNA1509_12334, RNA1509_14264, RNA1509_15, RNA1509_16104}
6. MligTC453_43721 Mlig061900.g2 8.98

 Int S/G2/M 

 Germline 

X2 P4HB Mlig061900.g2 {REF} {Length: 2916} {MligTC453_43721} {Pfam: Thioredoxin-like domain [PF13848.6, score=54.7]; ERp29, N-terminal domain [PF07912.13, score=28.0]; Thioredoxin [PF00085.20, score=20.6]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [Score=137, Expect=5e-40]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [Score=135, Expect=5e-38]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [Score=110, Expect=7e-29]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [Score=135, Expect=2e-38]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [Score=123, Expect=1e-33]} {RNA1509_1575} {SMEDTYPE: X2 [raj_facs_types]}
7. MligTC453_29875 Mlig020807.g4 8.89

 Irradiation 

 Int S/G2/M 

 Germline 

Epidermis I; Xins; Asexual_biased Mlig020807.g4 {REF} {Length: 2299} {MligTC453_29875} {Pfam: Immunoglobulin domain [PF13927.6, score=48.4]; Immunoglobulin I-set domain [PF07679.16, score=43.5]; Immunoglobulin domain [PF13895.6, score=34.1]; Immunoglobulin domain [PF00047.25, score=28.5]; Immunoglobulin V-set domain [PF07686.17, score=28.3]} {Smed: dd_Smed_v6_2673_0_1, dd_Smed_v6_2673_0_1, [Score=63.9, Expect=2e-10]} {RNA1509_1239, RNA1509_3377, RNA1509_3600, RNA1509_390, RNA1509_42, RNA1509_43026, RNA1509_95} {SMEDTYPE: Epidermis I [dd_Smed_v6_2673_0_1, contactin 2 (axonal) (CNTN2)]} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.293672.0]}
8. MligTC453_51843 Mlig009946.g3 8.88

 Int S/G2/M 

 Germline 

 S/G2/M, no gonads 

Neoblast; X1; Sexual_biased PABPC4 Mlig009946.g3 {REF} {Length: 4014} {MligTC453_51843} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.22, score=282.3]; Poly-adenylate binding protein, unique domain [PF00658.18, score=106.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.6, score=41.7]; Nup53/35/40-type RNA recognition motif [PF14605.6, score=34.7]; RNA binding motif [PF08777.11, score=24.7]; Protein of unknown function (DUF4523) [PF15023.6, score=22.9]; RNA recognition motif [PF16367.5, score=21.8]; Occluded RNA-recognition motif [PF16842.5, score=19.6]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [RH, Score=736, Expect=0.0]; ENSG00000070756, PABPC1, poly(A) binding protein cytoplasmic 1, [RH, Score=715, Expect=0.0]} {Mouse: ENSMUSG00000011257, Pabpc4, poly(A) binding protein, cytoplasmic 4, [RH, Score=728, Expect=0.0]; ENSMUSG00000022283, Pabpc1, poly(A) binding protein, cytoplasmic 1, [RH, Score=715, Expect=0.0]} {Dmel: FBgn0265297, pAbp, poly(A) binding protein, [RH, Score=671, Expect=0.0]} {Celegans: WBGene00003902, pab-1, Polyadenylate-binding protein, [RH, Score=664, Expect=0.0]} {Smed: dd_Smed_v6_11729_0_1, dd_Smed_v6_11729_0_1, [RH, Score=724, Expect=0.0]} {RNA1509_114, RNA1509_8584} {SMEDTYPE: Neoblast [dd_Smed_v6_11729_0_1, cytoplasmic poly(A) binding protein (PABPC)]} {SMEDTYPE: X1 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.36071.0]}
9. MligTC453_25872 Mlig032789.g12, Mlig032789.g1 8.49

 Irradiation 

 Int S/G2/M 

 Germline 

X1 DDX6

Mlig032789.g12 {REF} {Length: 3240} {MligTC453_25872} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.29, score=147.1]; Helicase conserved C-terminal domain [PF00271.31, score=98.2]} {Human: ENSG00000110367, DDX6, DEAD-box helicase 6, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000032097, Ddx6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, [RH, Score=659, Expect=0.0]} {Dmel: FBgn0004419, me31B, maternal expression at 31B, [RH, Score=651, Expect=0.0]} {Celegans: WBGene00000479, cgh-1, ATP-dependent RNA helicase cgh-1, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_1034_0_1, dd_Smed_v6_1034_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_16545, RNA1509_2093, RNA1509_85} {SMEDTYPE: X1 [raj_facs_types]}

Mlig032789.g1 {REF} {Length: 3240} {MligTC453_25872} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.29, score=147.1]; Helicase conserved C-terminal domain [PF00271.31, score=98.2]} {Human: ENSG00000110367, DDX6, DEAD-box helicase 6, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000032097, Ddx6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, [RH, Score=659, Expect=0.0]} {Dmel: FBgn0004419, me31B, maternal expression at 31B, [RH, Score=651, Expect=0.0]} {Celegans: WBGene00000479, cgh-1, ATP-dependent RNA helicase cgh-1, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_1034_0_1, dd_Smed_v6_1034_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_2093} {SMEDTYPE: X1 [raj_facs_types]}
10. MligTC453_47906 Mlig002525.g5 8.39

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig002525.g5 {REF} {Length: 1498} {MligTC453_47906} {RNA1509_260, RNA1509_318, RNA1509_361}
11. MligTC453_43722 Mlig011389.g5 8.32

 Int S/G2/M 

 Germline 

X2 P4HB Mlig011389.g5 {REF} {Length: 3265} {MligTC453_43722} {Pfam: Thioredoxin [PF00085.20, score=219.0]; Thioredoxin-like domain [PF13848.6, score=150.4]; Thioredoxin-like domain [PF13098.6, score=58.6]; Calsequestrin [PF01216.17, score=52.1]; Thioredoxin-like [PF13905.6, score=48.3]; OST3 / OST6 family, transporter family [PF04756.13, score=46.6]; ERp29, N-terminal domain [PF07912.13, score=42.6]; Thioredoxin-like [PF13899.6, score=42.0]; AhpC/TSA family [PF00578.21, score=36.3]; Redoxin [PF08534.10, score=31.2]; F plasmid transfer operon protein [PF13728.6, score=22.6]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [RH, Score=572, Expect=0.0]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [RH, Score=563, Expect=0.0]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [RH, Score=510, Expect=3e-178]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [RH, Score=565, Expect=0.0]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [RH, Score=578, Expect=0.0]} {RNA1509_1575, RNA1509_70} {SMEDTYPE: X2 [raj_facs_types]}
12. MligTC453_27298 Mlig004264.g2 8.05

 Int S/G2/M 

 Germline 

Xins; Sexual_biased CALR Mlig004264.g2 {REF} {Length: 2456} {MligTC453_27298} {Pfam: Calreticulin family [PF00262.18, score=289.7]} {Human: ENSG00000179218, CALR, calreticulin, [RH, Score=499, Expect=2e-176]} {Mouse: ENSMUSG00000003814, Calr, calreticulin, [RH, Score=500, Expect=7e-177]} {Dmel: FBgn0005585, Calr, Calreticulin, [RH, Score=495, Expect=3e-175]} {Celegans: WBGene00000802, crt-1, Calreticulin, [RH, Score=475, Expect=1e-167]} {Smed: dd_Smed_v6_220_0_4, dd_Smed_v6_220_0_4, [RH, Score=557, Expect=0.0]} {RNA1509_145, RNA1509_1668, RNA1509_8886} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.88366.0]}
13. MligTC453_32871 Mlig047723.g6 7.58

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig047723.g6 {REF} {Length: 1980} {MligTC453_32871} {RNA1509_25356}
14. MligTC453_47907 Mlig019340.g2 7.51

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig019340.g2 {REF} {Length: 2019} {MligTC453_47907} {RNA1509_24230, RNA1509_26964, RNA1509_32167, RNA1509_59, RNA1509_8674}
15. MligTC453_24230 Mlig002706.g5 7.39

 Irradiation 

 Int S/G2/M 

 Germline 

Neural (both ciliated and non-ciliated); Xins GLIPR1L1 Mlig002706.g5 {REF} {Length: 1252} {MligTC453_24230} {Pfam: Cysteine-rich secretory protein family [PF00188.26, score=82.5]} {Human: ENSG00000173401, GLIPR1L1, GLIPR1 like 1, [RH, Score=115, Expect=3e-31]} {Mouse: ENSMUSG00000020213, Glipr1l1, GLI pathogenesis-related 1 like 1, [RH, Score=125, Expect=3e-35]; ENSMUSG00000112611, Glipr1l3, GLI pathogenesis-related 1 like 3, [RH, Score=122, Expect=3e-34]} {Dmel: FBgn0038126, CG8483, [RH, Score=124, Expect=9e-34]} {Celegans: WBGene00009892, scl-11, SCP-Like extracellular protein, [RH, Score=87.4, Expect=2e-21]} {Smed: dd_Smed_v6_6756_0_1, dd_Smed_v6_6756_0_1, [RH, Score=156, Expect=2e-48]} {RNA1509_2231, RNA1509_234, RNA1509_46275, RNA1509_46434} {SMEDTYPE: Neural (both ciliated and non-ciliated) [dd_Smed_v6_6756_0_1, peptidase inhibitor 15 (PI15)]} {SMEDTYPE: Xins [raj_facs_types]}
16. MligTC453_26279 Mlig001691.g6 7.37

 Irradiation 

 Int S/G2/M 

 Germline 

WBP2NL Mlig001691.g6 {REF} {Length: 1461} {MligTC453_26279} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [RH, Score=53.9, Expect=6e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=56.6, Expect=9e-09]} {RNA1509_4521, RNA1509_48578}
17. MligTC453_22821 Mlig024523.g3 7.36

 Int S/G2/M 

 Germline 

X2; Sexual_biased HSP90B1 Mlig024523.g3 {REF} {Length: 3895} {MligTC453_22821} {Pfam: Hsp90 protein [PF00183.18, score=575.4]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.26, score=51.9]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.6, score=48.0]} {Human: ENSG00000166598, HSP90B1, heat shock protein 90 beta family member 1, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000020048, Hsp90b1, heat shock protein 90, beta (Grp94), member 1, [RH, Score=837, Expect=0.0]} {Dmel: FBgn0039562, Gp93, Glycoprotein 93, [Score=801, Expect=0.0]} {Celegans: WBGene00011480, enpl-1, Endoplasmin homolog, [Score=763, Expect=0.0]} {Smed: dd_Smed_v6_758_1_1, dd_Smed_v6_758_1_1, [Score=896, Expect=0.0]} {RNA1509_4445, RNA1509_48304, RNA1509_48533, RNA1509_55621} {SMEDTYPE: X2 [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.9642.0]}
18. MligTC453_44983 Mlig033002.g2 7.33

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig033002.g2 {REF} {Length: 1062} {MligTC453_44983} {Pfam: Protein of unknown function (DUF1180) [PF06679.12, score=20.0]} {RNA1509_17718, RNA1509_26294, RNA1509_34070, RNA1509_39435}
19. MligTC453_23578 Mlig011676.g2 7.3

 Irradiation 

 Int S/G2/M 

 Germline 

X1; Xins; self-renewal TUBB Mlig011676.g2 {REF} {Length: 2016} {MligTC453_23578} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.25, score=227.9]; Tubulin C-terminal domain [PF03953.17, score=147.5]; Misato Segment II tubulin-like domain [PF10644.9, score=24.5]} {Human: ENSG00000229684, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000224156, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000227739, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000232421, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000235067, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000258947, TUBB3, tubulin beta 3 class III, [Score=766, Expect=0.0]; ENSG00000196230, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000183311, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000232575, TUBB, tubulin beta class I, [Score=766, Expect=0.0]; ENSG00000188229, TUBB4B, tubulin beta 4B class IVb, [Score=764, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin beta 2B class IIb, [Score=764, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin beta 2A class IIa, [Score=759, Expect=0.0]; ENSG00000104833, TUBB4A, tubulin beta 4A class IVa, [Score=756, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [Score=731, Expect=0.0]; ENSG00000198211, AC092143.1, novel protein (MC1R-TUBB3 readthrough), [Score=730, Expect=0.0]; ENSG00000261456, TUBB8, tubulin beta 8 class VIII, [Score=728, Expect=0.0]} {Mouse: ENSMUSG00000001525, Tubb5, tubulin, beta 5 class I, [Score=766, Expect=0.0]; ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [Score=764, Expect=0.0]; ENSMUSG00000045136, Tubb2b, tubulin, beta 2B class IIB, [Score=764, Expect=0.0]; ENSMUSG00000036752, Tubb4b, tubulin, beta 4B class IVB, [Score=764, Expect=0.0]; ENSMUSG00000058672, Tubb2a, tubulin, beta 2A class IIA, [Score=759, Expect=0.0]; ENSMUSG00000062591, Tubb4a, tubulin, beta 4A class IVA, [Score=756, Expect=0.0]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [Score=731, Expect=0.0]} {Dmel: FBgn0003890, betaTub97EF, beta-Tubulin at 97EF, [Score=745, Expect=0.0]} {Celegans: WBGene00006537, tbb-2, Tubulin beta-2 chain, [Score=752, Expect=0.0]} {Smed: dd_Smed_v6_83_0_1, dd_Smed_v6_83_0_1, [Score=771, Expect=0.0]} {RNA1509_44} {SMEDTYPE: X1; Xins [raj_facs_types]} {SMEDTYPE: self-renewal [4]}
20. MligTC453_43720 Mlig011389.g3 7.2

 Int S/G2/M 

 Germline 

X2 P4HB Mlig011389.g3 {REF} {Length: 3271} {MligTC453_43720} {Pfam: Thioredoxin [PF00085.20, score=219.0]; Thioredoxin-like domain [PF13848.6, score=150.4]; Thioredoxin-like domain [PF13098.6, score=58.6]; Calsequestrin [PF01216.17, score=52.1]; Thioredoxin-like [PF13905.6, score=48.3]; OST3 / OST6 family, transporter family [PF04756.13, score=46.6]; ERp29, N-terminal domain [PF07912.13, score=42.6]; Thioredoxin-like [PF13899.6, score=42.0]; AhpC/TSA family [PF00578.21, score=36.3]; Redoxin [PF08534.10, score=31.2]; F plasmid transfer operon protein [PF13728.6, score=22.6]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [RH, Score=572, Expect=0.0]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [RH, Score=563, Expect=0.0]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [RH, Score=510, Expect=3e-178]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [RH, Score=565, Expect=0.0]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [RH, Score=578, Expect=0.0]} {RNA1509_1575} {SMEDTYPE: X2 [raj_facs_types]}
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